Tandem Repeats Finder Program written by:
Gary Benson
Department of Biomathematical Sciences
Mount Sinai School of Medicine
Version 3.01
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Yeast Chromosome 1 - chri_230209 Parameters: 2 7 7 80 10 50 500 Length: 230209

Tables:   1   

This is table  1  of  1  ( 45 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--61
5
12.2
5
76
23
58
39
60
0
0
0.97
2--62
2
33.0
2
75
15
60
40
59
0
0
0.98
11876--11935
27
2.2
27
93
0
102
16
25
25
33
1.96
12474--12839
48
7.6
48
91
0
561
25
11
29
34
1.90
13000--13113
45
2.5
45
81
5
140
48
5
33
13
1.64
13001--13128
15
8.5
15
79
8
118
46
5
33
14
1.67
14791--14821
13
2.4
13
94
0
53
58
9
12
19
1.62
24308--24367
27
2.2
27
93
0
102
16
25
25
33
1.96
24690--24780
21
4.3
21
79
5
103
2
16
26
54
1.53
25165--25278
45
2.5
45
81
5
140
48
5
33
13
1.64
25166--25293
15
8.5
15
79
8
118
46
5
33
14
1.67
25401--26304
135
6.7
135
90
2
503
20
14
32
31
1.93
25673--27105
135
10.6
135
95
0
2230
20
14
32
32
1.93
31123--31152
2
15.0
2
92
0
51
50
3
0
46
1.18
76836--76864
15
1.9
15
100
0
58
20
20
37
20
1.94
76983--77049
24
2.8
24
80
8
66
52
1
37
8
1.42
77502--77546
3
15.0
3
95
0
81
64
0
35
0
0.94
77577--77602
12
2.2
12
100
0
52
34
42
15
7
1.75
99945--99976
14
2.3
14
100
0
64
37
12
12
37
1.81
100371--100414
18
2.4
18
88
0
61
4
34
22
38
1.75
100465--100516
27
1.9
27
92
0
86
25
38
7
28
1.83
101479--101511
15
2.2
15
94
0
57
24
24
9
42
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
113055--113099
3
15.0
3
90
0
72
4
0
28
66
1.11
116484--116520
9
4.1
9
89
0
56
32
8
35
24
1.85
120163--120189
5
5.4
5
100
0
54
0
0
18
81
0.69
124929--124958
9
3.3
9
95
0
51
53
33
3
10
1.51
139552--139610
12
4.9
12
75
8
66
23
42
27
6
1.79
190131--190161
14
2.2
14
100
0
62
48
38
6
6
1.55
192287--192322
3
11.7
3
94
5
63
36
30
0
33
1.58
198835--198864
11
2.7
11
94
0
51
0
16
23
60
1.36
204258--205690
135
10.6
135
95
0
2212
31
32
14
20
1.93
204225--206230
135
14.9
135
89
4
1956
31
31
15
21
1.94
204258--206500
270
8.3
268
88
3
2053
31
31
15
21
1.94
204258--206230
405
4.9
403
87
3
2164
31
31
15
21
1.94
205608--206635
135
7.6
135
86
2
1305
30
29
17
23
1.97
205608--206635
270
3.8
270
88
1
1454
30
29
17
23
1.97
206748--206830
15
5.5
15
84
8
98
14
32
4
48
1.65
207227--207288
21
3.0
21
82
0
79
59
25
14
0
1.35
207614--207702
27
3.3
27
88
0
124
33
23
21
21
1.97
219186--219220
15
2.3
15
90
0
52
8
34
11
45
1.71
223120--223155
1
36.0
1
100
0
72
0
0
0
100
0.00
229752--229807
15
3.7
15
85
0
76
23
5
14
57
1.58
229947--229977
11
2.9
11
95
4
55
25
0
45
29
1.54
230109--230205
6
16.2
6
88
11
146
0
0
63
36
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
230111--230207
2
51.5
2
70
11
71
0
0
62
37
0.95

Tables:   1   

The End!